Instructions for generating input files for Argot2 consensus process
If your goal is to compare Argot2 performances and you want to provide customized scores then you can use the consensus analysis.
Input files for this kind of analysis MUST be ZIP archives containing a TAB separated values file (its name is irrelevant). Scores have to be positive numbers between 0.000001, to ensure finite results, since computations involve logarithms, and 300. The higher the score the more significant the GO term.
Example file
As an example, the following table could be generated in Excel and then copied/pasted into a text file, which will then have to be zipped and uploaded.
| >sequence001 | ||
| GO:0003824 | 104 | D1DVV71 |
| GO:0005488 | 39.1547338619711 | Pfam-B_281 |
| GO:0005488 | 34.9993997594098 | Q1DGC91 |
| >sequence002 | ||
| GO:0043565 | 49.2218413774445 | C0EKP0 |
| GO:0003677 | 48.999992097773 | HR1 |
| >sequence003 | ||
| GO:0016020 | 0.0157360407937456 | Rotamase |
| ... | ... | ... |